TMIP-EMAT
0.5.3
Contents:
Introduction to EMAT
Installation and Configuration
Exploratory Scoping
Experimental Designs
Core Models
Meta Models
Databases
Analysis
Examples
Glossary
Methodology Index
References
TMIP-EMAT
»
Index
Index
_
|
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
K
|
L
|
M
|
N
|
O
|
P
|
R
|
S
|
T
|
U
|
V
|
W
|
X
_
__call__() (emat.MetaModel method)
A
abbrev (emat.Parameter attribute)
(emat.scope.parameter.BooleanParameter attribute)
(emat.scope.parameter.CategoricalParameter attribute)
(emat.scope.parameter.IntegerParameter attribute)
(emat.scope.parameter.RealParameter attribute)
AbstractCoreModel (class in emat.model)
add_box() (emat.analysis.Visualizer method)
add_parser() (emat.model.FilesCoreModel method)
add_scope_meas() (emat.database.Database method)
(emat.database.SQLiteDB method)
add_to_allowed_set() (emat.Box method)
address (emat.Constant attribute)
(emat.Measure attribute)
(emat.Parameter attribute)
(emat.scope.parameter.BooleanParameter attribute)
(emat.scope.parameter.CategoricalParameter attribute)
(emat.scope.parameter.IntegerParameter attribute)
(emat.scope.parameter.RealParameter attribute)
allow_short_circuit (emat.model.AbstractCoreModel property)
archive() (emat.model.AbstractCoreModel method)
(emat.model.GBNRTCModel method)
archive_path (emat.model.FilesCoreModel attribute)
async_experiments() (emat.model.AbstractCoreModel method)
B
BooleanParameter (class in emat.scope.parameter)
Bounds (class in emat)
box
Box (class in emat)
box_number() (emat.analysis.PrimBox method)
Boxes (class in emat)
boxes (emat.analysis.CART property)
(emat.analysis.Prim property)
boxes_to_dataframe() (emat.analysis.CART method)
(emat.analysis.Prim method)
build_tree() (emat.analysis.CART method)
C
CART
(class in emat.analysis)
case
cat_for_index() (emat.scope.parameter.BooleanParameter method)
(emat.scope.parameter.CategoricalParameter method)
CategoricalParameter (class in emat.scope.parameter)
ChainedBox (class in emat)
Classification and Regression Trees (CART)
clear_box() (emat.analysis.Visualizer method)
complete() (emat.analysis.Visualizer method)
compute_std() (emat.MetaModel method)
Constant (class in emat)
Contrast Experiments
contrast_experiments() (in module emat.analysis)
core model
corr (emat.Parameter attribute)
(emat.scope.parameter.BooleanParameter attribute)
(emat.scope.parameter.CategoricalParameter attribute)
(emat.scope.parameter.IntegerParameter attribute)
(emat.scope.parameter.RealParameter attribute)
create_metamodel() (in module emat)
create_metamodel_from_data() (emat.model.AbstractCoreModel method)
create_metamodel_from_design() (emat.model.AbstractCoreModel method)
create_metamodel_from_designs() (emat.model.AbstractCoreModel method)
cross_val_predicts() (emat.MetaModel method)
cross_val_scores() (emat.MetaModel method)
D
Database (class in emat.database)
default (emat.Constant property)
delete_experiment_measures() (emat.database.Database method)
(emat.database.SQLiteDB method)
delete_experiments() (emat.database.Database method)
(emat.database.SQLiteDB method)
delete_scope() (emat.database.Database method)
(emat.database.SQLiteDB method)
(emat.Scope method)
desc (emat.Constant attribute)
(emat.Measure attribute)
(emat.Parameter attribute)
(emat.scope.parameter.BooleanParameter attribute)
(emat.scope.parameter.CategoricalParameter attribute)
(emat.scope.parameter.IntegerParameter attribute)
(emat.scope.parameter.RealParameter attribute)
design
Design of Experiments
design_experiments() (emat.model.AbstractCoreModel method)
(emat.Scope method)
(in module emat.experiment.experimental_design)
design_refpoint_test() (in module emat.experiment.experimental_design)
design_sensitivity_tests() (in module emat.experiment.experimental_design)
determine_coi() (emat.analysis.Prim method)
Display Experiments
display_experiments() (in module emat.analysis)
dist_def (emat.Parameter attribute)
(emat.scope.parameter.BooleanParameter attribute)
(emat.scope.parameter.CategoricalParameter attribute)
(emat.scope.parameter.IntegerParameter attribute)
(emat.scope.parameter.RealParameter attribute)
distdef (emat.scope.parameter.CategoricalParameter property)
drop_restriction() (emat.analysis.PrimBox method)
dtype (emat.Constant attribute)
dump() (emat.Scope method)
duplicate() (emat.Scope method)
E
ensure_dtypes() (emat.model.AbstractCoreModel method)
(emat.Scope method)
enter_run_model() (emat.model.AbstractCoreModel method)
ExcelCoreModel (class in emat.model)
existing_run_id() (emat.database.SQLiteDB method)
exit_run_model() (emat.model.AbstractCoreModel method)
experiment
Experimental Design
Exploratory Scoping
explore() (emat.analysis.PrimBox method)
F
Feature Scoring
feature_scores() (emat.model.AbstractCoreModel method)
(in module emat.analysis.feature_scoring)
FileParser (class in emat.model.core_files.parsers)
FilesCoreModel (class in emat.model)
find_box() (emat.analysis.Prim method)
formula (emat.Measure attribute)
G
GBNRTCModel (class in emat.model)
get_abbrev() (emat.Parameter method)
(emat.scope.parameter.BooleanParameter method)
(emat.scope.parameter.CategoricalParameter method)
(emat.scope.parameter.IntegerParameter method)
(emat.scope.parameter.RealParameter method)
get_all_names() (emat.Scope method)
get_cat_values() (emat.Scope method)
get_constant_names() (emat.Scope method)
get_constants() (emat.Scope method)
get_db_info() (emat.database.Database method)
(emat.database.SQLiteDB method)
get_dtype() (emat.Scope method)
get_experiment_archive_path() (emat.model.AbstractCoreModel method)
(emat.model.GBNRTCModel method)
get_experiment_id() (emat.database.SQLiteDB method)
get_length_scales() (emat.MetaModel method)
get_lever_names() (emat.Scope method)
get_levers() (emat.Scope method)
get_measure_names() (emat.Scope method)
get_measures() (emat.Scope method)
get_new_metamodel_id() (emat.database.Database method)
(emat.database.SQLiteDB method)
get_parameter_names() (emat.Scope method)
get_parameters() (emat.Scope method)
get_parser() (emat.model.FilesCoreModel method)
get_uncertainties() (emat.Scope method)
get_uncertainty_names() (emat.Scope method)
Getter (class in emat.model.core_files.parsers)
H
hmm() (emat.analysis.PrimBox method)
(emat.analysis.Visualizer method)
I
ignore_crash (emat.model.AbstractCoreModel property)
index_for_cat() (emat.scope.parameter.BooleanParameter method)
(emat.scope.parameter.CategoricalParameter method)
info() (emat.database.Database method)
(emat.Measure method)
(emat.Scope method)
init_xlm() (emat.database.Database method)
(emat.database.SQLiteDB method)
inspect() (emat.analysis.PrimBox method)
IntegerParameter (class in emat.scope.parameter)
Interactive Visualizer
invalidate_experiment_runs() (emat.database.SQLiteDB method)
invert() (emat.scope.parameter.BooleanParameter method)
(emat.scope.parameter.CategoricalParameter method)
io_experiment() (emat.model.AbstractCoreModel method)
K
killed_indicator (emat.model.AbstractCoreModel property)
kind (emat.Measure attribute)
L
Latin Hypercube Design of Experiments
lever
lever_selectors() (emat.analysis.Visualizer method)
lever_thresholds (emat.Box property)
lever_thresholds() (emat.ChainedBox method)
,
[1]
LinearAndGaussian() (in module emat.learn)
load_archived_measures() (emat.model.FilesCoreModel method)
load_measures() (emat.model.AbstractCoreModel method)
(emat.model.FilesCoreModel method)
(emat.model.GBNRTCModel method)
local_directory (emat.model.AbstractCoreModel property)
(emat.model.FilesCoreModel property)
lock (emat.database.Database property)
log() (emat.database.SQLiteDB method)
(emat.model.AbstractCoreModel method)
lowerbound (emat.Bounds attribute)
M
make_parameter() (in module emat)
MappingParser (class in emat.model.core_files.parsers)
mark_run_invalid() (emat.database.SQLiteDB method)
max (emat.scope.parameter.CategoricalParameter property)
measure
Measure (class in emat)
measure_names (emat.model.core_files.parsers.FileParser property)
(emat.model.core_files.parsers.MappingParser property)
(emat.model.core_files.parsers.TableParser property)
measure_selectors() (emat.analysis.Visualizer method)
measure_thresholds (emat.Box property)
measure_thresholds() (emat.ChainedBox method)
,
[1]
merge_database() (emat.database.SQLiteDB method)
merge_log() (emat.database.SQLiteDB method)
meta-model
Meta-model Creation
MetaModel (class in emat)
metamodeltype (emat.Measure attribute)
min (emat.scope.parameter.CategoricalParameter property)
mix_length_scales() (emat.MetaModel method)
model
model_path (emat.model.FilesCoreModel attribute)
Monte Carlo Simulation
Multi-objective Optimization
N
n_factors() (emat.Scope method)
n_sample_factors() (emat.Scope method)
name (emat.Measure attribute)
new_box() (emat.analysis.Visualizer method)
new_run_id() (emat.database.Database method)
(emat.database.SQLiteDB method)
new_selection() (emat.analysis.Visualizer method)
O
optimize() (emat.model.AbstractCoreModel method)
P
parameter
Parameter (class in emat)
parcoords() (emat.analysis.Visualizer method)
parser (emat.Measure attribute)
Patient Rule Induction Method (PRIM)
pert() (in module emat.util.distributions)
pick_new_experiments() (emat.MetaModel method)
policy
Policy Contrast
post_process() (emat.model.AbstractCoreModel method)
(emat.model.GBNRTCModel method)
predict() (emat.MetaModel method)
preprocess_raw_input() (emat.MetaModel method)
PRIM
Prim (class in emat.analysis)
prim() (emat.analysis.Visualizer method)
PrimBox (class in emat.analysis)
print_log() (emat.database.SQLiteDB method)
ptype (emat.Constant attribute)
(emat.Parameter attribute)
(emat.scope.parameter.BooleanParameter attribute)
(emat.scope.parameter.CategoricalParameter attribute)
(emat.scope.parameter.IntegerParameter attribute)
(emat.scope.parameter.RealParameter attribute)
PythonCoreModel (class in emat.model)
R
raw() (emat.model.core_files.parsers.MappingParser method)
(emat.model.core_files.parsers.TableParser method)
read() (emat.model.core_files.parsers.FileParser method)
(emat.model.core_files.parsers.MappingParser method)
(emat.model.core_files.parsers.TableParser method)
read_all_experiment_ids() (emat.database.SQLiteDB method)
read_box() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_box_names() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_box_parent_name() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_box_parent_names() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_boxes() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_constants() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_design_names() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_experiment_all() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_experiment_id() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_experiment_ids() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_experiment_measure_sources() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_experiment_measures() (emat.database.Database method)
(emat.database.SQLiteDB method)
(emat.model.AbstractCoreModel method)
read_experiment_parameters() (emat.database.Database method)
(emat.database.SQLiteDB method)
(emat.model.AbstractCoreModel method)
read_experiments() (emat.model.AbstractCoreModel method)
read_levers() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_measures() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_metamodel() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_metamodel_ids() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_scope() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_scope_names() (emat.database.Database method)
(emat.database.SQLiteDB method)
read_uncertainties() (emat.database.Database method)
(emat.database.SQLiteDB method)
RealParameter (class in emat.scope.parameter)
Reference Experiment
rel_output_path (emat.model.FilesCoreModel attribute)
relevant_features (emat.Box attribute)
remove_from_allowed_set() (emat.Box method)
replace_allowed_set() (emat.Box method)
resample() (emat.analysis.PrimBox method)
resolved_archive_path (emat.model.FilesCoreModel property)
resolved_model_path (emat.model.AbstractCoreModel property)
(emat.model.FilesCoreModel property)
Road_Capacity_Investment() (in module emat.model.core_python.core_python_examples)
Robust Optimization
robust_evaluate() (emat.model.AbstractCoreModel method)
robust_optimize() (emat.model.AbstractCoreModel method)
run() (emat.model.AbstractCoreModel method)
(emat.model.GBNRTCModel method)
run_experiment() (emat.model.PythonCoreModel method)
run_experiments() (emat.model.AbstractCoreModel method)
run_model() (emat.model.GBNRTCModel method)
run_reference_experiment() (emat.model.AbstractCoreModel method)
S
Scatter Plot Matrix (SPLOM)
scatter_graphs() (in module emat.viz)
scatter_graphs_2() (in module emat.viz)
scenario
Scenario Discovery
scope
Scope (class in emat)
scope (emat.Box property)
Search over Levers
select() (emat.analysis.CART method)
(emat.analysis.PrimBox method)
selection_feature_scores() (emat.analysis.Visualizer method)
selectors() (emat.analysis.Visualizer method)
set_active_selection_color() (emat.analysis.Visualizer method)
set_bounds() (emat.Box method)
set_experiment_id() (emat.database.SQLiteDB method)
set_lower_bound() (emat.Box method)
set_upper_bound() (emat.Box method)
setup() (emat.model.AbstractCoreModel method)
(emat.model.GBNRTCModel method)
shortname (emat.Measure property)
(emat.Parameter property)
(emat.scope.parameter.BooleanParameter property)
(emat.scope.parameter.CategoricalParameter property)
(emat.scope.parameter.IntegerParameter property)
(emat.scope.parameter.RealParameter property)
shortname_if_any (emat.Measure property)
(emat.Parameter property)
(emat.scope.parameter.BooleanParameter property)
(emat.scope.parameter.CategoricalParameter property)
(emat.scope.parameter.IntegerParameter property)
(emat.scope.parameter.RealParameter property)
show_boxes() (emat.analysis.CART method)
(emat.analysis.Prim method)
show_pairs_scatter() (emat.analysis.PrimBox method)
show_ppt() (emat.analysis.PrimBox method)
show_tradeoff() (emat.analysis.PrimBox method)
show_tree() (emat.analysis.CART method)
SPLOM
splom() (emat.analysis.PrimBox method)
(emat.analysis.Visualizer method)
SQLiteDB (class in emat.database)
start_transcad() (emat.model.GBNRTCModel method)
stats (emat.analysis.CART property)
(emat.analysis.Prim property)
stats_to_dataframe() (emat.analysis.CART method)
(emat.analysis.Prim method)
status() (emat.analysis.Visualizer method)
store_scope() (emat.database.Database method)
(emat.database.SQLiteDB method)
(emat.Scope method)
success_indicator (emat.model.AbstractCoreModel property)
T
TableParser (class in emat.model.core_files.parsers)
tags (emat.Measure property)
(emat.Parameter property)
(emat.scope.parameter.BooleanParameter property)
(emat.scope.parameter.CategoricalParameter property)
(emat.scope.parameter.IntegerParameter property)
(emat.scope.parameter.RealParameter property)
three_way() (emat.analysis.Visualizer method)
Threshold Scoring
threshold_feature_scores() (in module emat.analysis.feature_scoring)
thresholds (emat.Box attribute)
to_emat_box() (emat.analysis.PrimBox method)
to_emat_boxes() (emat.analysis.Prim method)
to_json() (emat.analysis.PrimBox method)
tradeoff_selector() (emat.analysis.Prim method)
(emat.analysis.PrimBox method)
transform (emat.Measure attribute)
tree_chooser() (emat.analysis.CART method)
triangle() (in module emat.util.distributions)
two_way() (emat.analysis.Visualizer method)
TwoWayFigure (class in emat.analysis)
U
uncertainty
uncertainty_selectors() (emat.analysis.Visualizer method)
uncertainty_thresholds (emat.Box property)
uncertainty_thresholds() (emat.ChainedBox method)
,
[1]
Univariate Sensitivity Testing
update() (emat.analysis.PrimBox method)
update_database() (emat.database.SQLiteDB method)
update_database_for_run_ids() (emat.database.SQLiteDB method)
update_scope() (emat.database.Database method)
(emat.database.SQLiteDB method)
upperbound (emat.Bounds attribute)
V
vacuum() (emat.database.SQLiteDB method)
values (emat.Constant property)
(emat.scope.parameter.BooleanParameter property)
(emat.scope.parameter.CategoricalParameter property)
Visualizer (class in emat.analysis)
W
Worst Case Discovery
write_box() (emat.database.Database method)
(emat.database.SQLiteDB method)
write_boxes() (emat.database.Database method)
(emat.database.SQLiteDB method)
write_ex_m_1() (emat.database.SQLiteDB method)
write_experiment_all() (emat.database.Database method)
(emat.database.SQLiteDB method)
write_experiment_measures() (emat.database.Database method)
(emat.database.SQLiteDB method)
write_experiment_parameters() (emat.database.Database method)
(emat.database.SQLiteDB method)
write_experiment_parameters_1() (emat.database.Database method)
(emat.database.SQLiteDB method)
write_metamodel() (emat.database.Database method)
(emat.database.SQLiteDB method)
write_ppt_to_stdout() (emat.analysis.PrimBox method)
X
XLRM